Package: detzrcr 0.3.1

detzrcr: Compare Detrital Zircon Suites

Compare detrital zircon suites by uploading univariate, U-Pb age, or bivariate, U-Pb age and Lu-Hf data, in a 'shiny'-based user-interface. Outputs publication quality figures using 'ggplot2', and tables of statistics currently in use in the detrital zircon geochronology community.

Authors:Magnus Kristoffersen [aut, cre]

detzrcr_0.3.1.tar.gz
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detzrcr_0.3.1.tgz(r-4.4-any)detzrcr_0.3.1.tgz(r-4.3-any)
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detzrcr.pdf |detzrcr.html✨
detzrcr/json (API)
NEWS

# Install 'detzrcr' in R:
install.packages('detzrcr', repos = c('https://magnuskristoffersen.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/magnuskristoffersen/detzrcr/issues

On CRAN:

4.65 score 9 stars 1 scripts 271 downloads 52 exports 62 dependencies

Last updated 2 years agofrom:1df053f398. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 29 2024
R-4.5-winNOTEOct 29 2024
R-4.5-linuxNOTEOct 29 2024
R-4.4-winNOTEOct 29 2024
R-4.4-macNOTEOct 29 2024
R-4.3-winNOTEOct 29 2024
R-4.3-macNOTEOct 29 2024

Exports:calc_abcalc_denscalc_dens_histcalc_dkwcalc_hfcalc_o_paramcalc_p_applycalc_quantilescheck_conccombine_matricesconcXconcYdzr_mixfind_maximafind_plot_maxfind_plot_minfind_plot_min_maxhf_lineshfhf_churhfhf_dmlambda_lulambda_u235lambda_u238luhf_churluhf_dmluhf_zrcmake_tilingo_param_matrix_ageo_param_matrix_tdmplot_axis_limplot_bw_themeplot_densplot_dens_histplot_ecdfplot_hfplot_labelsplot_point_scaleplot_quantilesplot_reiminkplot_text_optionsplot_tilepopulate_matrixquant_boundsreiminkrun_detzrcrsatkoski_1dsatkoski_1d_matrixsatkoski_2dsatkoski_2d_matrixtile_functilingu238_u235_ratio

Dependencies:base64encbslibcachemclicolorspacecommonmarkcrayoncrosstalkdigestDTevaluatefansifarverfastmapfontawesomefsggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmepillarpkgconfigpromisesR6rappdirsRColorBrewerRcpprlangrmarkdownsassscalesshinysourcetoolstibbletinytexutf8vctrsviridisLitewithrxfunxtableyaml

detzrcr user guide

Magnus Kristoffersen

Rendered fromdetzrcr-vignette.Rmdusingknitr::rmarkdownon Oct 29 2024.

Last update: 2022-11-09
Started: 2016-11-18

Readme and manuals

Help Manual

Help pageTopics
Calculate slope and interceptcalc_ab
Calculate 1D density of age datacalc_dens
Calculate scaled 1d densitycalc_dens_hist
Dvoretzky-Kiefer-Wolfowitz inequalitycalc_dkw
Calculate hafnium values.calc_hf
Calculate 1-Ocalc_o_param
Calculate intercepts and associated p-valuecalc_p_apply
Calculate quantilescalc_quantiles
Check concordancy of input agescheck_conc
Combine two square matricescombine_matrices
Calculate U235 at given ageconcX
Calculate U238 at given ageconcY
Calculate mixing modeldzr_mix
Find maxima.find_maxima
Find maximum value for plotting.find_plot_max
Find minimum value for plottingfind_plot_min
Wrapper function for 'find_plot_min' and 'find_plot_max'find_plot_min_max
Produce CHUR and DM lineshf_lines
176Hf/177Hf value of CHUR.hfhf_chur
176Lu/177Hf value of DM.hfhf_dm
Decay constant of 176Lu.lambda_lu
Decay constants of 235U.lambda_u235
Decay constants of 238U.lambda_u238
176Lu/177Hf value of CHUR.luhf_chur
176Lu/177Hf value of DM.luhf_dm
176Lu/177Hf value of average continental crust.luhf_zrc
Produce data.frame of 1-O matrix suitable for geom_tilemake_tiling
Dataset Natal groupNatal_group
Populate matrix with age 1-Oo_param_matrix_age
Populate matrix with model age 1-Oo_param_matrix_tdm
Axes limits for ggplot2plot_axis_lim
Stripped down theme for ggplot2plot_bw_theme
Plot 1d densityplot_dens
Plot 1d density with histogramplot_dens_hist
Plot ecdfplot_ecdf
Plot Lu-Hf dataplot_hf
Labels for ggplot2 plotsplot_labels
Add manual shape scale to scatter plotplot_point_scale
Plot quantilesplot_quantiles
Plot likelihood of intercept agesplot_reimink
Modify text options of plotsplot_text_options
Tile plot of 1-O matrixplot_tile
Populate matrixpopulate_matrix
Calculate confidence bands for lower and upper quartilequant_bounds
Calculate upper and lower concordia intercepts from discordant detrital zircon datareimink
Launch shiny interfacerun_detzrcr
Calculate 1d likeness of detrital zircon populationssatkoski_1d
Pairwise Satkoski likenesssatkoski_1d_matrix
Calculate 2d (age and Lu-Hf) likeness of detrital zircon populationssatkoski_2d
Pairwise 2d Satkoski likenesssatkoski_2d_matrix
Ready 1-O matrix for tile plottile_func
Apply tile_func to vectortiling
Atomic ratio of 238U and 235U.u238_u235_ratio